Definition of UPGMA. Meaning of UPGMA. Synonyms of UPGMA

- UPGMA (unweighted pair group method with arithmetic mean) is a simple agglomerative (bottom-up) hierarchical clustering method. It also has a weighted...
- The guide tree in the initial versions of Clustal was constructed via a UPGMA cluster analysis of the pairwise alignments, hence the name CLUSTAL.cf....
- taxa ( a {\displaystyle a} to e {\displaystyle e} ) have been clustered by UPGMA based on a matrix of genetic distances. The hierarchical clustering dendrogram...
- tree-building methods include unweighted pair group method using arithmetic mean (UPGMA) and Neighbor joining, which are distance-based methods, Maximum parsimony...
- schemes include complete linkage clustering, average linkage clustering (UPGMA and WPGMA), and Ward's method. In the naive algorithm for agglomerative...
- constant rate of evolution (i.e., a molecular clock) across lineages. The UPGMA (Unweighted Pair Group Method with Arithmetic mean) and WPGMA (Weighted...
- phylogenetics methods. Distance-matrix methods such as neighbor-joining or UPGMA, which calculate genetic distance from multiple sequence alignments, are...
- based methods for phylogeny reconstruction: Additive tree reconstruction UPGMA Neighbor joining Fitch–Margoliash Additive tree reconstruction is based...
- and Michener. The WPGMA method is similar to its unweighted variant, the UPGMA method. The WPGMA algorithm constructs a rooted tree (dendrogram) that reflects...
- Hierarchical clustering Molecular clock Neighbor-joining Single-linkage clustering UPGMA WPGMA Sorensen T (1948). "A method of establishing groups of equal amplitude...