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TRANSFAC (TRANScription
FACtor database) is a
manually curated database of
eukaryotic transcription factors,
their genomic binding sites and DNA binding...
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factors Open
Regulatory Annotation Database Phylogenetic footprinting TRANSFAC database YeTFaSCo Latchman DS (December 1997). "Transcription factors:...
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chemogenomics database focused on drug
discovery in
tropical diseases TRANSFAC: a
database about eukaryotic transcription factors,
their genomic binding...
- ChIP-seq Protein-DNA interactions,
transcript factor binding sites GEO,
TRANSFAC, JASPAR,
ENCODE CLIP-seq, PAR-CLIP,
iCLIP MicroRNA-mRNA
regulations StarBase...
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information from
sources such as HapMap, UCSC GoldenPath, dbSNP, OMIM, and
TRANSFAC.
Users can
obtain information about tag SNPs and
simulate LD
blocks for...
- that can be used to
classify and
identify the
function of gene products.
TRANSFAC (TRANScription
FACtor database) is a
manually curated database of eukaryotic...
-
Expert curation Public [8]
Archived 2007-05-16 at the
Wayback Machine TRANSFAC Mammals Expert/literature
curation Public/Private [9]
Archived 2008-10-23...
- from PFMs. PWMs are also
known as PSSMs. An
example of a PFM from the
TRANSFAC database for the
transcription factor AP-1: The
first column specifies...
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Schacherer (COO).[citation needed] The company's
original product was the
TRANSFAC database, a
platform for the
description and
analysis of gene regulatory...
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freely available for
scientific community at http://jaspar.genereg.net/.
TRANSFAC –
Transcription Factor Database HOCOMOCO - HOmo
sapiens COmprehensive MOdel...
