Definition of TIGRFAMs. Meaning of TIGRFAMs. Synonyms of TIGRFAMs

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Definition of TIGRFAMs

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Meaning of TIGRFAMs from wikipedia

- families found in Bacteria and Archaea. Like Pfam, TIGRFAMs uses the HMMER package written by Sean Eddy. TIGRFAMs was produced originally at The Institute for...
- CATH-Gene3D, CDD, HAMAP, MobiDB, PANTHER, Pfam, SMART, SUPERFAMILY, SFLD, TIGRFAMs, classifies proteins into families and predicts the presence of domains...
- specific sequence-structure features to specific chemical capabilities. TIGRFAMs TIGRFAMs is a collection of protein families, featuring curated multiple sequence...
- system of the bacterium Francisella novicida. Its original name, from a TIGRFAMs protein family definition built in 2012, reflects the prevalence of its...
- model (HMM) for its detection were provided in 2012 in a release of the TIGRFAMs database of protein families. Cas12a appears in many bacterial species...
- SwissProt, and the Protein Data Bank, and HMM databases such as Pfam, TIGRFAMs and SUPERFAMILY. The four search types phmmer, hmmsearch, hmmscan and jackhmmer...
- imported from a number of external source databases (Pfam, SMART, COG, PRK, TIGRFAMs). What is unique about NCBI-curated domains is that they use 3D-structure...
- context of the relationships between protein families and their evolution . TIGRFAMs and Gene3D are referred to for structural information and annotation of...
- annotation was synthesized using the HMMer suite, OriFinder, TBLASTN, Pfam, TIGRFam, TnpPred, Alien_Hunter, and antiSMASH software. A functional tunicamycin...