- Kinetics, pp. 6 et
seq, ISBN 9780873229357 Agnafors, Sara;
Norman Kjellström, Anna; Torgerson, Jarl; Rusner,
Marie (November 2019). "
Somatic comorbidity in...
-
JointSNVMix MaCH
Magnolia DCNN Neu
Somatic NGSEP Pisces Platypus realSFS Reveel SAMtools SNVmix SOAPsnp SomaticSeq SomaticSniper
Strelka VarDict VarScan Nielsen...
- CAPP-
Seq (cancer
personalized profiling by deep sequencing) is a next-generation
sequencing based method used to
quantify circulating DNA in
cancer (ctDNA)...
-
FusionCatcher FusionCatcher searches for novel/known
somatic fusion genes, translocations, and
chimeras in RNA-
seq data (stranded/unstranded paired-end
reads from...
-
limitations of the
predecessor methods are not
inherited by EPIC-
Seq:
germline or
somatic variant dependency of
common liquid biopsy methods which is also...
-
Pappo A,
Easton J,
Dalton J,
Hedlund E, et al. (April 2014). "Recurrent
somatic structural variations contribute to
tumorigenesis in
pediatric osteosarcoma"...
- haplotype-phase, Strand-
seq enables discovery of the full
spectrum of
somatic structural variation classes ≥200kb in size. Strand-
seq overcomes limitations...
- Drop-
Seq is a high-throughput, single-cell RNA
sequencing (scRNA-
seq)
technology used to
analyze the mRNA
expression of
thousands of
individual cells...
- that fall into two
fundamental types: germ
cells and
somatic cells.
During development,
somatic cells will
become more
specialized and form the three...
-
offers workflows for DNA and RNA
analyses and the
detection of
germline and
somatic mutations,
using open-source tools. It is
designed to
improve the computing...
