- -
SAMtools reduces the
effort needed to use SAM/BAM
files by
hiding low-level details. As third-party
projects were
trying to use code from
SAMtools despite...
- with the VCF
format in 2011, and BCFtools,
which was
included as part of
SAMtools until being split into an
independent package in 2014. The
standard is...
- PMID 19505943. Edmunds,
Scott (2021-02-17). "Play it again,
SAMtools. Q&A with the
SAMtools team on 12
years of
providing bioinformatics "glue"". GigaScience...
-
analysis tools that work with SAM/BAM
click here.
FASTQ format SAM
format SAMtools CRAM
format List of file
formats for
molecular biology Compression of Genomic...
- ISSN 1367-4803. PMC 6298042. PMID 30020420. "Description of A2M
alignment format".
SAMtools.
Archived from the
original on 2022-08-15. "soedinglab/hh-suite: reformat...
- Institute, and
became widely known through its
implementation within the
SAMtools software suite. Each line
consists of 5 (or
optionally 6) tab-separated...
-
Retrieved 2
October 2019. "The
Browser Extensible Data (BED) format" (PDF).
samtools.github.io. "GA4GH BED v1.0: A
formal standard sets
ground rules for genomic...
-
bacteria Sustained Acoustic Medicine, a
medical treatment for
arthritis SAMtools (for
Sequence Alignment Map), a data
storage format for DNA sequencing...
-
generation sequencing (NGS)
through the
development of
software such as the
SAMtools NGS utilities, the Burrows–Wheeler
aligner (BWA), MAQ,
TreeSoft and TreeFam...
- PMC 3083090. PMID 21245279. "Htsjdk by
Broad Institute".
samtools.github.io.
Retrieved 2018-10-14. "
Samtools". www.htslib.org.
Retrieved 2018-10-14. "JBrowse...
