- In chemistry,
rotamers are
chemical species that
differ from one
another primarily due to
rotations about one or more
single bonds.
Various arrangements...
-
conformations termed rotamers.
Rotamer libraries are
derived from the
statistical analysis of many
protein structures. Backbone-independent
rotamer libraries describe...
-
known as "
rotamers". The
methods attempt to
identify the set of
rotamers that
minimize the model's
overall energy.
These methods use
rotamer libraries...
- backbone-dependent
rotamer library provides the frequencies, mean
dihedral angles, and
standard deviations of the
discrete conformations (known as
rotamers) of the...
-
Gauche effect, a
characterization in
which the
gauche rotamer is more
stable than the anti
rotamer Gauche (Scheme implementation), an
implementation of...
-
length is
higher for the anti-
rotamer (151.4 pm vs. 150 pm). The
steric repulsion between the
fluorine atoms in the
gauche rotamer causes increased CCF bond...
-
direct steric interactions between the Cγ of the side
chain in the gauche+
rotamer and the
backbone nitrogen of the next
residue when ψ is near -60°. This...
-
crystallographic disorder describes the
cocrystallization of more than one
rotamer, conformer, or
isomer where the
center of m**** of each form is identical...
- DEE
description included criteria for the
elimination of
single rotamers and of
rotamer pairs,
although this can be expanded. In the
following discussion...
- val, thr, etc.)
likely to have
wrong rotamers. 2.0 - 2.5 As 2.5 - 3.0, but
number of
sidechains in
wrong rotamer is
considerably less. Many
small errors...
