Definition of HMMER. Meaning of HMMER. Synonyms of HMMER

Here you will find one or more explanations in English for the word HMMER. Also in the bottom left of the page several parts of wikipedia pages related to the word HMMER and, of course, HMMER synonyms and on the right images related to the word HMMER.

Definition of HMMER

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Meaning of HMMER from wikipedia

- HMMER is a free and commonly used software package for sequence analysis written by Sean Eddy. Its general usage is to identify homologous protein or...
- simulations. The partners of the project included Oxford University. The HMMER Genetic Research project made use of the Hidden Markov model to search for...
- LLVM-GCC and Clang both struggled to compete with GCC 4.5.0 in the timed HMMer benchmark of a Pfam database search. LLVM-GCC and Clang were about 23% slower(...
- As of 2016[update] projects include the use of Hidden Markov models in HMMER, Infernal Pfam and Rfam. Eddy graduated June, 1982 from Marion Center Area...
- CS-BLAST, BLAT Bowtie Clustal DECIPHER FASTA Fast statistical alignment HMMER HH-suite JAligner MAFFT MAVID MUSCLE Nextflow Phyloscan Probalign ProbCons...
- (HHpred, HHsearch) free server and software for protein sequence searching HMMER, a free hidden Markov model program for protein sequence analysis Hidden...
- Federal Government market. Strand Life Sciences TimeLogic offers DeCypher FPGA-accelerated BLAST, Smith-Waterman, HMMER and other sequence search tools....
- protein families found in Bacteria and Archaea. Like Pfam, TIGRFAMs uses the HMMER package written by Sean Eddy. TIGRFAMs was produced originally at The Institute...
- Stockholm format as do the probabilistic database search tools, Infernal and HMMER, and the phylogenetic analysis tool Xrate. Stockholm format files often...
- by matching with Hidden Markov Models is a po****r alternative, such as HMMER. An alternative to BLAST for comparing two banks of sequences is PLAST....