-
FASTQ format is a text-based
format for
storing both a
biological sequence (usually
nucleotide sequence) and its
corresponding quality scores. Both the...
- ****igned to each
nucleotide base call in
automated sequencer traces. The
FASTQ format encodes phred scores as
ASCII characters alongside the read sequences...
- Rice PM (April 2010). "The
Sanger FASTQ file
format for
sequences with
quality scores, and the Solexa/Illumina
FASTQ variants".
Nucleic Acids Research...
- created, such as
FASTQ, GFF, and BED. However, no
official specifications were
published at the time,
which affected some
formats such as
FASTQ when sequencing...
-
ASCII of base
QUALity plus 33 (same as the
quality string in the
Sanger FASTQ format). A base
quality is the phred-scaled base
error probability which...
-
flexible data compression, API
access and
conversion to
other formats such as
FASTQ. NCBI
announced their plan to
close the NCBI SRA in
February 2011 due to...
-
original on 2024-05-23.
Retrieved 2017-10-06. "Genozip |
Compression for
FASTQ, BAM, VCF". Genozip.
Archived from the
original on 2024-05-27. Retrieved...
- list of
sequencing and
analysis tools that work with SAM/BAM
click here.
FASTQ format SAM
format SAMtools CRAM
format List of file
formats for molecular...
- S2CIDÂ 252357508. Lan, Divon; Hughes,
Daniel S T; Llamas,
Bastien (7 July 2023). "Deep
FASTQ and BAM co-compression in
Genozip 15". bioRxiv. doi:10.1101/2023.07.07.548069...
- fast and
flexible manner.
orfipy can work with
plain or
gzipped FASTA and
FASTQ sequences, and
provides several options to fine-tune ORF searches; these...
