-
Degradome sequencing (
Degradome-Seq), also
referred to as
parallel analysis of RNA ends (PARE), is a
modified version of 5'-Rapid
Amplification of cDNA...
- protease-substrate repertoires, also
called "protease
degradomes". The
scope of
these degradomes can
range from cell, tissue, and organism-wide scales...
-
ceRNA networks from CLIP-Seq (HITS-CLIP, PAR-CLIP, iCLIP, CLASH) and
degradome sequencing data.
StarBase provides miRFunction and
ceRNAFunction web tools...
-
carbohydrate with the most
structural complexity, as a substrate. The RG-II
degradome contains 23
enzymes that
target sequential glycosidic linkage in the RG-II...
-
exploring microRNA-mRNA
interaction maps from
Argonaute CLIP-Seq and
Degradome-Seq data".
Nucleic Acids Research. 39 (Database issue): D202–D209. doi:10...
- PMID 32269230.
starBase database: a
database for
exploring microRNA–mRNA
interaction maps from
Argonaute CLIP-Seq(HITS-CLIP, PAR-CLIP) and
Degradome-Seq data....
-
uncapped 3' ends of
cleaved or
degraded mRNAs.
These methods are
known as
Degradome sequencing or PARE.
Validation of
target cleavage in
specific mRNAs is...
-
cleaved transcripts (GMUCT),
parallel analysis of RNA ends (PARE), and
degradome sequencing use the T4
ligase of the
Illumina sequencing platform to sequence...
-
exploring microRNA–mRNA
interaction maps from
Argonaute CLIP-Seq and
Degradome-Seq data".
Nucleic Acids Res. 39 (Database issue): D202–D209. doi:10.1093/nar/gkq1056...
-
exploring microRNA-mRNA
interaction maps from
Argonaute CLIP-Seq and
Degradome-Seq data".
Nucleic Acids Research. 39 (Database issue): D202–D209. doi:10...
