- good
example of this is the Gene
Expression Omnibus (GEO) from NCBI or
ArrayExpress from EBI. A
specialized repository ****ociated
primarily with the brand...
-
databases may hold many
species genomes, or a
single model organism genome.
ArrayExpress:
archive of
functional genomics data;
stores data from high-throughput...
- RNA-seq
experiments from
ArrayExpress repositories. It aims to
answer questions such as:
Which genes are
specifically expressed in kidney? What is the expression...
- FAIR
Guiding Principles for
scientific data
management and
stewardship ArrayExpress--a
public database of
microarray experiments and gene
expression profiles...
- sets
received accession numbers 1 and 2 (E-MEXP-1 and E-MEXP-2) of the
ArrayExpress database, one of the two
major genomic data repositories,
which now contains...
-
Tikhonov A,
Parkinson H,
Petryszak R,
Sarkans U,
Brazma A (January 2015). "
ArrayExpress update—simplifying data submissions".
Nucleic Acids Research. 43 (Database...
-
European Bioinformatics Institute (EBI) has a
similar database called ArrayExpress which has over 100,000
samples from over 3,000 experiments. All together...
-
custom designed Agilent microarray expression chip
submitted to EMBL-EBI [
ArrayExpress: E-MEXP-3019
which represented the
coding and the non-coding regions...
- translation. Ensembl: [2] OmicTools: [3]
Transcriptome Browser: [4]
ArrayExpress: [5] Portals:
Biology Science Technology Functional genomics Gene expression...
- doi:10.1099/ijs.0.02920-0. PMID 15143036. E-MTAB-349 <
Experiments <
ArrayExpress < EMBL-EBI Akum,
Fidele N.; Kumar, Ravi; Lai, Gary; Williams, Catherine...
